2024
A molecular toolkit of cross-feeding strains for engineering synthetic yeast communities
Huadong Peng, Alexander P. S. Darlington, Eric J. South, Hao-Hong Chen, Wei Jiang & Rodrigo Ledesma-Amaro, published in Nature Microbiology | Volume 9 | March 2024 | 848–863
Alīna Reķēna, Marina J. Pinheiro, Nemailla Bonturi, Isma Belouah, Eliise Tammekivi, Koit Herodes, Eduard J. Kerkhoven, Petri-Jaan Lahtvee, published in PLOS Computational Biology
Young-Kyoung Park, Lara Sellés Vidal, David Bell, Jure Zabret, Mladen Soldat, Martin Kavšček & Rodrigo Ledesma-Amaro, Published in Biotechnology for Biofuels and Bioproducts, 17(94), 2024.
PERFECOAT High Performance Bio-based Functional Coatings for Wood and Decorative Applications
Alexander Wentzel conference presentation at EUBCE 2024 in Marseille, France.
2023
Alicia E. Graham & Rodrigo Ledesma-Amaro, published in Nature Communications | (2023)14:2231
Mitrano, Denise; Bigalke, Moritz; Booth, Andy; Catarci Carteny, Camilla; Coffin, Scott; Egger, Matthias; Godikas, Andreas; Hüffer, Thorsten; Koelmans, Albert; Lahive, Elma; Mattsson, Karin; Reynaud, Stefanie; Wagner, Stephan
in Microplastics and Nanoplastics, 3(Article number: 24 (2023)), 01 November 2023.; DOI 10.1186/s43591-023-00072-4
Spontaneously established syntrophic yeast communities improve bioproduction
Kaur Aulakh, Simran; Sellés Vidal, Lara; Peng, Huadong; Jayasree Varma, Sreejith; Herrera-Dominguez, Lucia; Ralser, Markus; Ledesma-Amaro, Rodrigo
in Nature Chemical Biology volume 19; 29 May 2023; DOI 10.1016/j.scitotenv.2022.160038
Huadong Peng; Ruiqi Chen; William M. Shaw; Piotr Hapeta; Wei Jiang; David J. Bell; Tom Ellis; Rodrigo Ledesma-Amaro
in CS Synth. Biol. 2023, 12, 6, 1739–1749; 23 May 2023; DOI 10.1016/j.scitotenv.2022.160038
Host-aware RNA-based control of synthetic microbial consortia
Alice Boo; Harman Mehta; Rodrigo Ledesma Amaro; Guy-Bart Stan
in bioRxiv; 13 May 2023; DOI 10.1101/2023.05.15.540816
Lucas Coppens; Tanya Tschirhart; Dagmar H Leary; Sophie M Colston; Jaimee R Compton; William Judson Hervey; Karl L Dana; Gary J Vora; Sergio Bordel; Rodrigo Ledesma‐Amaro
in Molecular Systems Biology (2023), 19; 27 February 2023;
DOI 10.15252/msb.202110523
A primer to directed evolution: current methodologies and future directions
Lara Sellés Vidal; Mark Isalan; John T. Heap; Rodrigo Ledesma-Amaro
in RSC Chemical Biology, 271-291; 23 January 2023; DOI 10.1039/d2cb00231k
2022
Inducible expression of large gRNA arrays for multiplexed CRISPRai applications
William M. Shaw, Lucie Studená, Kyler Roy, Piotr Hapeta, Nicholas S. McCarty, Alicia E. Graham, Tom Ellis & Rodrigo Ledesma-Amaro, published in Nature Communications | (2022)13:4984
High Performance Bio-based Functional Coatings for Wood and Decorative Applications (PERFECOAT)
Skopp, A.; Liu, Y.; Sieber, J.
Poster-Presentation at the Key Technologies in the Bioeconomy Conference, 27–29th September 2022 in Straubing, Germany.
What makes Yarrowia lipolytica well suited for industry?
Park, Young-Kyoung; Ledesma-Amaro, Rodrigo
published in CellPress – Trends in BioTechnology, 41(2), P242-254,05 August 2022, DOI: 10.1016/j.tibtech.2022.07.006
Eliza Atkinson; Zoltan Tuza; Giansimone Perrino; Guy-Bart Stan; Rodrigo Ledesma-Amaro
in Microbial Cell Factories, Volume 21 (1), p.115 e00200; 14 June, 2022
DOI: 10.1186/s12934-022-01842-0
Development of a dedicated Golden Gate Assembly Platform (RtGGA) for Rhodotorula toruloides
Bonturi, N.; Pinheiro; Monteiro de Oliveira; Rusadze; Eichinge; Liudžiūtė; Sabedotti De Biaggi; Brauer; Remm; Alves Miranda; Ledesma-Amaro; Lahtvee, Petri-Jaan
in Metabolic Engineering Communications, Volume 15, e00200; 23 May 2022
C. Askhama; V. H. Pauna; A. Boulay; P. Fantke; O. Jolliet; J. Lavoie; A.M. Booth; C. Coutris; F. Verones; M. Weber; M. G. Vijver; A. Lusher; C. Hajjar
in Science of The Total Environment, Volume 859, Part 2, 10 February 2023, 160038; DOI 10.1016/j.scitotenv.2022.160038